COSNet: Cost Sensitive Network for node label prediction on graphs with highly unbalanced labelings
Version 1.10.0

Package that implements the COSNet classification algorithm. The algorithm predicts node labels in partially labeled graphs where few positives are available for the class being predicted.

AuthorMarco Frasca and Giorgio Valentini -- Universita' degli Studi di Milano
Bioconductor views Classification GraphAndNetwork Network NeuralNetwork
Date of publicationNone
MaintainerMarco Frasca<frasca@di.unimi.it>
LicenseGPL (>= 2)
Version1.10.0
URL https://github.com/m1frasca/COSNet_GitHub
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("COSNet")

Getting started

Package overview

Popular man pages

cosnet.cross.validation: Cross validation procedure for the COSNet algorithm
COSNet-package: R package for binary classification and node ranking on...
find.division.not.strat: Random partitioning of input data
generate_labels: Generate random labels
optimizep: Optimizing algorithm parameters
reg_data: Function to compute the regularized version of COSNet (Frasca...
runSubnet: Realizing the network dynamics.
See all...

All man pages Function index File listing

Man pages

COSNet: Cost Sensitive Network for node label prediction on graphs...
cosnet.cross.validation: Cross validation procedure for the COSNet algorithm
COSNet-package: R package for binary classification and node ranking on...
find.division.not.strat: Random partitioning of input data
find.division.strat: Compute a stratified random partition of the input data
generate_labels: Generate random labels
generate_points: Compute the points to be separated in Step 2 of COSNet...
optimizep: Optimizing algorithm parameters
optimize_pos_above: Alternative algortihm for optimizing parameters
reg_data: Function to compute the regularized version of COSNet (Frasca...
runSubnet: Realizing the network dynamics.

Functions

COSNet Man page Source code
COSNet-package Man page
cosnet.cross.validation Man page Source code
find.division.not.strat Man page Source code
find.division.strat Man page Source code
generate_labels Man page Source code
generate_points Man page Source code
onAttach Source code
onLoad Source code
optimize_pos_above Man page Source code
optimizep Man page Source code
reg_data Man page Source code
runSubnet Man page Source code

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/COSNet.R
R/cosnet.cross.validation.R
R/find.division.not.strat.R
R/find.division.strat.R
R/generate_labels.R
R/generate_points.R
R/optimize_pos_above.R
R/optimizep.R
R/reg_data.R
R/runSubnet.R
build
build/vignette.rds
inst
inst/doc
inst/doc/COSNet_v.R
inst/doc/COSNet_v.Rnw
inst/doc/COSNet_v.pdf
inst/unitTests
inst/unitTests/test_COSNet.R
inst/unitTests/test_cosnet.cross.validation.R
inst/unitTests/test_find.division.not.strat.R
inst/unitTests/test_find.division.strat.R
inst/unitTests/test_generate_labels.R
inst/unitTests/test_optimize_pos_above.R
inst/unitTests/test_optimizep.R
inst/unitTests/test_reg_data.R
inst/unitTests/test_runSubnet.R
man
man/COSNet-package.Rd
man/COSNet.Rd
man/cosnet.cross.validation.Rd
man/find.division.not.strat.Rd
man/find.division.strat.Rd
man/generate_labels.Rd
man/generate_points.Rd
man/optimize_pos_above.Rd
man/optimizep.Rd
man/reg_data.Rd
man/runSubnet.Rd
src
src/COSNet.c
tests
tests/runTests.R
vignettes
vignettes/COSNet_v.Rnw
COSNet documentation built on May 20, 2017, 9:44 p.m.

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