netbenchmark: Benchmarking of several gene network inference methods

This package implements a benchmarking of several gene network inference algorithms from gene expression data.

AuthorPau Bellot, Catharina Olsen, Patrick Meyer, with contributions from Alexandre Irrthum
Date of publication2015-02-24 15:28:26
MaintainerPau Bellot <pau.bellot@upc.edu>
LicenseGPL-3
Version0.99.3
http://biosys.geek-lab.org/

View on R-Forge

Files in this package

netbenchmark/CHANGES
netbenchmark/DESCRIPTION
netbenchmark/NAMESPACE
netbenchmark/R
netbenchmark/R/GeneNet.wrap.R netbenchmark/R/Genie3.wrap.R netbenchmark/R/RcppExports.R netbenchmark/R/aracne.wrap.R netbenchmark/R/c3net.wrap.R netbenchmark/R/clr.wrap.R netbenchmark/R/comp.metr.R netbenchmark/R/dataset.subsample.R netbenchmark/R/evaluate.R netbenchmark/R/experiments.bench.R netbenchmark/R/mrnet.wrap.R netbenchmark/R/mrnetb.wrap.R netbenchmark/R/mutrank.wrap.R netbenchmark/R/netbenchmark.R netbenchmark/R/noise.bench.R netbenchmark/R/pcit.wrap.R netbenchmark/R/zscore.wrap.R
netbenchmark/build
netbenchmark/build/vignette.rds
netbenchmark/inst
netbenchmark/inst/NEWS
netbenchmark/inst/doc
netbenchmark/inst/doc/netbenchmark.R
netbenchmark/inst/doc/netbenchmark.Rmd
netbenchmark/inst/doc/netbenchmark.html
netbenchmark/inst/unitTests
netbenchmark/inst/unitTests/test_datasource.subsample.R
netbenchmark/inst/unitTests/test_evaluate.R
netbenchmark/man
netbenchmark/man/GeneNet.wrap.Rd netbenchmark/man/Genie3.wrap.Rd netbenchmark/man/aracne.wrap.Rd netbenchmark/man/c3net.wrap.Rd netbenchmark/man/clr.wrap.Rd netbenchmark/man/comp.metr.Rd netbenchmark/man/datasource.subsample.Rd netbenchmark/man/evaluate.Rd netbenchmark/man/experiments.bench.Rd netbenchmark/man/mrnet.wrap.Rd netbenchmark/man/mrnetb.wrap.Rd netbenchmark/man/mutrank.wrap.Rd netbenchmark/man/netbenchmark-package.Rd netbenchmark/man/netbenchmark.Rd netbenchmark/man/noise.bench.Rd netbenchmark/man/pcit.wrap.Rd netbenchmark/man/rate.Rd netbenchmark/man/zsc.Rd netbenchmark/man/zscore.wrap.Rd
netbenchmark/src
netbenchmark/src/RcppExports.cpp
netbenchmark/src/netbenchmark_init.c
netbenchmark/src/rate.cpp
netbenchmark/src/zsc.cpp
netbenchmark/tests
netbenchmark/tests/runTests.R
netbenchmark/vignettes
netbenchmark/vignettes/netbenchmark.Rmd

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