netReg fits linear regression models using network-penalization. Graph prior knowledge, in the form of biological networks, is being incorporated into the loss function of the linear model. The networks describe biological relationships such as co-regulation or dependency of the same transcription factors/metabolites/etc. yielding a part sparse and part smooth solution for coefficient profiles.
|Author||Simon Dirmeier [aut, cre]|
|Bioconductor views||FeatureExtraction GraphAndNetwork Network Regression Software StatisticalMethod|
|Maintainer||Simon Dirmeier <[email protected]>|
|License||GPL-3 | BSL-1.0 + file LICENSE|
|Package repository||View on Bioconductor|
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