grouplasso-methods: Fit a linear regression model the group lasso penalty

In netReg: Network-Regularized Regression Models

Description

Fit a linear regression model the group LASSO penalty.

Usage

group.lasso(
  X,
  Y,
  grps = NULL,
  lambda = 1,
  thresh = 1e-05,
  maxit = 1e+05,
  learning.rate = 0.01,
  family = gaussian
)

## S4 method for signature 'matrix,numeric'
group.lasso(
  X,
  Y,
  grps = NULL,
  lambda = 1,
  thresh = 1e-05,
  maxit = 1e+05,
  learning.rate = 0.01,
  family = gaussian
)

## S4 method for signature 'matrix,matrix'
group.lasso(
  X,
  Y,
  grps = NULL,
  lambda = 1,
  thresh = 1e-05,
  maxit = 1e+05,
  learning.rate = 0.01,
  family = gaussian
)

Arguments

X	input matrix, of dimension (n x p) where n is the number of observations and p is the number of covariables. Each row is an observation vector.
Y	output matrix, of dimension (n x q) where n is the number of observations and q is the number of response variables. Each row is an observation vector.
grps	vector of integers or NA_integer_ of length p that encodes the grouping of variables, e.g., c(1, 1, 2, 2, NA)
lambda	numerical shrinkage parameter
thresh	numerical threshold for optimizer
maxit	maximum number of iterations for optimizer (integer)
learning.rate	step size for Adam optimizer (numerical)
family	family of response, e.g., gaussian or binomial

Value

An object of class edgenet

beta	the estimated (p x q)-dimensional coefficient matrix B.hat
alpha	the estimated (q x 1)-dimensional vector of intercepts
parameters	regularization parameters
lambda	regularization parameter lambda)
family	a description of the error distribution and link function to be used. Can be a netReg::family function or a character string naming a family function, e.g. gaussian or "gaussian".
call	the call that produced the object

References

Yuan, Ming and Lin, Yi (2006), Model selection and estimation in regression with grouped variables.
Journal of the Royal Statistical Society: Series B

Meier, Lukas and Van De Geer, Sara and Bühlmann, Peter (2008), The group lasso for logistic regression.
Journal of the Royal Statistical Society: Series B

Examples

X <- matrix(rnorm(100 * 10), 100, 5)
b <- rnorm(5)
grps <- c(NA_integer_, 1L, 1L, 2L, 2L)

# estimate the parameters of a Gaussian model
Y <- X %*% b + rnorm(100)
fit <- group.lasso(X = X, Y = Y, grps = grps, family = gaussian, maxit = 10)

netReg documentation built on Nov. 8, 2020, 5:17 p.m.