The EnrichmentBrowser package implements essential functionality for the enrichment analysis of gene expression data. The analysis combines the advantages of set-based and network-based enrichment analysis in order to derive high-confidence gene sets and biological pathways that are differentially regulated in the expression data under investigation. Besides, the package facilitates the visualization and exploration of such sets and pathways.
|Author||Ludwig Geistlinger, Gergely Csaba, Ralf Zimmer|
|Bioconductor views||DifferentialExpression GeneExpression GeneSetEnrichment GraphAndNetwork Microarray Network NetworkEnrichment Pathways RNASeq ReportWriting Visualization|
|Maintainer||Ludwig Geistlinger <Ludwig.Geistlinger@bio.ifi.lmu.de>|
|Package repository||View on Bioconductor|
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