ToPASeq: Package for Topology-based Pathway Analysis of RNASeq data
Version 1.10.0

Implementation of seven methods for topology-based pathway analysis of both RNASeq and microarray data: SPIA, DEGraph, TopologyGSA, TAPPA, PRS, PWEA and a visualization tool for a single pathway.

Package details

AuthorIvana Ihnatova, Eva Budinska
Bioconductor views DifferentialExpression GeneExpression GraphAndNetwork Microarray NetworkEnrichment Pathways RNASeq Software Visualization
MaintainerIvana Ihnatova <[email protected]>
LicenseAGPL-3
Version1.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("ToPASeq")

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ToPASeq documentation built on May 31, 2017, 3:26 p.m.