res: Functions to extract and display results

In ToPASeq: Topology-based pathway analysis of RNA-seq data

Description

Functions to extract and display results

Usage

res(object)

## S3 method for class 'topResult'
res(object)

## S3 method for class 'topResult'
topo.sig(object)

## S3 method for class 'topResult'
degtable(object)

Arguments

object	an output from one of following function "SPIA","PRS", "CePA", "PWEA", "TAPPA", "TopologyGSA","DEGraph", "clipper"
...	other arguments

Methods (by class)

• topResult: Extracts results of topology-based pathway analysis

• topResult: Extracts topological significance of genes

• topResult: Extracts results of differential expression analysis on genes

ToPASeq documentation built on Nov. 8, 2020, 4:59 p.m.