apComplex: Estimate protein complex membership using AP-MS protein data

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

AuthorDenise Scholtens <dscholtens@northwestern.edu>
Date of publicationNone
MaintainerDenise Scholtens <dscholtens@northwestern.edu>
LicenseLGPL
Version2.40.0

View on Bioconductor

Files in this package

apComplex/DESCRIPTION
apComplex/NAMESPACE
apComplex/R
apComplex/R/LCjoin.R apComplex/R/adjBinFUN.R apComplex/R/bhmaxSubgraph.R apComplex/R/findComplexes.R apComplex/R/fisherFUN.R apComplex/R/mergeComplexes.R apComplex/R/plotComplex.R apComplex/R/sortComplexes.R
apComplex/build
apComplex/build/vignette.rds
apComplex/data
apComplex/data/HMSPCI.rda
apComplex/data/HMSPCIgraph.rda
apComplex/data/Krogan.rda
apComplex/data/MBMEcHMSPCI.rda
apComplex/data/MBMEcKrogan.rda
apComplex/data/MBMEcTAP.rda
apComplex/data/SBMHcHMSPCI.rda
apComplex/data/SBMHcTAP.rda
apComplex/data/TAP.rda
apComplex/data/TAPgraph.rda
apComplex/data/UnRBBcHMSPCI.rda
apComplex/data/UnRBBcTAP.rda
apComplex/data/apEX.rda
apComplex/data/apEXG.rda
apComplex/data/gavin06FilteredEstimates.rda
apComplex/data/gavinBP2006.rda
apComplex/data/krogan06FilteredEstimates.rda
apComplex/data/kroganBPMat2006.rda
apComplex/data/yNameTAP.rda
apComplex/data/yTAP.rda
apComplex/inst
apComplex/inst/doc
apComplex/inst/doc/apComplex.R
apComplex/inst/doc/apComplex.Rnw
apComplex/inst/doc/apComplex.pdf
apComplex/man
apComplex/man/FilteredEstimates.Rd apComplex/man/HMSPCI.Rd apComplex/man/Krogan.Rd apComplex/man/LCjoin.Rd apComplex/man/MBMEcHMSPCI.Rd apComplex/man/MBMEcKrogan.Rd apComplex/man/MBMEcTAP.Rd apComplex/man/TAP.Rd apComplex/man/apEX.Rd apComplex/man/bhmaxSubgraph.Rd apComplex/man/findComplexes.Rd apComplex/man/gavinBP2006.Rd apComplex/man/kroganBPMat2006.Rd apComplex/man/mergeComplexes.Rd apComplex/man/plotComplex.Rd apComplex/man/sortComplexes.Rd apComplex/man/yNameTAP.Rd apComplex/man/yTAP.Rd
apComplex/vignettes
apComplex/vignettes/apComplex.Rnw

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