SBMLR: SBML-R Interface and Analysis Tools

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This package contains a systems biology markup language (SBML) interface to R.

Author
Tomas Radivoyevitch, Vishak Venkateswaran
Date of publication
None
Maintainer
Tomas Radivoyevitch <radivot@gmail.com>
License
GPL-2
Version
1.70.0
URLs

View on Bioconductor

Man pages

Ops.SBMLR
Check the equality of the species and reactions of two SBMLR...
readSBML
Convert an SBML file into an R object of class SBMLR
readSBMLR
Convert an SBMLR file into an R model object of class SBMLR
S4toS3
Converts an S4 class SBML object created by rsbml into an S3...
saveSBML
Saves an SBMLR object to an SBML file.
saveSBMLR
Save an R model object of class SBMLR to a file.
sim
Simulate a model of S3 class SBMLR
summary.SBMLR
Get summary information from an SBMLR model

Files in this package

SBMLR/DESCRIPTION
SBMLR/NAMESPACE
SBMLR/NEWS
SBMLR/R
SBMLR/R/Ops.SBMLR.r
SBMLR/R/S4toS3.r
SBMLR/R/readSBML.r
SBMLR/R/readSBMLR.r
SBMLR/R/saveSBML.r
SBMLR/R/saveSBMLR.r
SBMLR/R/sim.r
SBMLR/R/summary.SBMLR.r
SBMLR/build
SBMLR/build/vignette.rds
SBMLR/inst
SBMLR/inst/BMCcancerFolates
SBMLR/inst/BMCcancerFolates/Fig2runMorrisonAllegra.r
SBMLR/inst/BMCcancerFolates/Fig3ross.r
SBMLR/inst/BMCcancerFolates/Fig4yeoh.r
SBMLR/inst/BMCcancerFolates/Fig5RossYeoh.r
SBMLR/inst/BMCcancerFolates/Fig6Rand.r
SBMLR/inst/BMCcancerFolates/Fig7cheungData.r
SBMLR/inst/BMCcancerFolates/Fig8cheung.r
SBMLR/inst/BMCcancerFolates/preFig6Rand.r
SBMLR/inst/BMCcancerFolates/readme.txt
SBMLR/inst/doc
SBMLR/inst/doc/quick-start.R
SBMLR/inst/doc/quick-start.Rnw
SBMLR/inst/doc/quick-start.pdf
SBMLR/inst/models
SBMLR/inst/models/SOD2006JD.xml
SBMLR/inst/models/SOD2012JD.xml
SBMLR/inst/models/curto.r
SBMLR/inst/models/curto.xml
SBMLR/inst/models/curtoNatural.R
SBMLR/inst/models/morrison.r
SBMLR/inst/models/morrison.xml
SBMLR/inst/models/runCurto.R
SBMLR/inst/models/runSOD2006.R
SBMLR/inst/models/runSOD2012.R
SBMLR/inst/models/sod.R
SBMLR/inst/models/sod.xml
SBMLR/inst/models/sodNatural.R
SBMLR/man
SBMLR/man/Ops.SBMLR.Rd
SBMLR/man/S4toS3.Rd
SBMLR/man/readSBML.Rd
SBMLR/man/readSBMLR.Rd
SBMLR/man/saveSBML.Rd
SBMLR/man/saveSBMLR.Rd
SBMLR/man/sim.Rd
SBMLR/man/summary.SBMLR.Rd
SBMLR/vignettes
SBMLR/vignettes/manual.doc
SBMLR/vignettes/quick-start.Rnw
SBMLR/vignettes/readme.txt