OmnipathR: OmniPath web service client

A client for the OmniPath web service ( It also includes functions to transform and pretty print some of the downloaded data.

Package details

AuthorAlberto Valdeolivas [aut] (<>), Denes Turei [cre, aut] (<>), Attila Gabor [aut]
Bioconductor views DataImport DataRepresentation GeneRegulation GeneSignaling GraphAndNetwork Network Pathways Software SystemsBiology ThirdPartyClient
MaintainerDenes Turei <>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


Try the OmnipathR package in your browser

Any scripts or data that you put into this service are public.

OmnipathR documentation built on Nov. 8, 2020, 8:10 p.m.