get_interaction_resources: Retrieve a list of interaction resources available in...

In OmnipathR: OmniPath web service client

Description

Gets the names of the resources from https://omnipath.org/interactions.

Usage

get_interaction_resources(dataset = NULL)

get_interaction_databases(...)

Arguments

dataset	a dataset within the interactions query type. Currently available datasets are 'omnipath', 'kinaseextra', 'pathwayextra', 'ligrecextra', 'dorothea', 'tf_target', 'tf_mirna', 'mirnatarget' and 'lncrna_mrna'
...	Passed to get_interaction_resources.

Value

character vector with the names of the interaction databases

See Also

get_resources, import_all_interactions, import_omnipath_interactions, import_pathwayextra_interactions, import_kinaseextra_interactions, import_ligrecextra_interactions, import_mirnatarget_interactions, import_dorothea_interactions

Examples

get_interaction_resources()

OmnipathR documentation built on Nov. 8, 2020, 8:10 p.m.