import_omnipath_complexes: Imports protein complexes from OmniPath

Description Usage Arguments Value See Also Examples

Description

Imports the complexes stored in Omnipath database from https://omnipathdb.org/complexes.

Usage

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Arguments

cache_file

path to an earlier data file

resources

complexes not reported in these databases are removed. See get_complexes_databases for more information.

...

Passed to import_omnipath_complexes.

Value

A dataframe containing information about complexes

See Also

get_complexes_databases

Examples

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complexes = import_omnipath_complexes(
    resources = c('CORUM', 'hu.MAP')
)

OmnipathR documentation built on Nov. 8, 2020, 8:10 p.m.