print_path_es: print network paths given by edge sequence
In OmnipathR: OmniPath web service client
Description
Usage
Arguments
Value
See Also
Examples
View source: R/print_interactions.R
Description
Prints the interactions in the path in a nice format.
Usage
1
2
3
print_path_es(edgeSeq, G)
printPath_es(...)
Arguments
edgeSeq
edge sequence
G
igraph object (from ptms or any interaction dataset)
...
Passed to print_path_es.
Value
Interactions displayed in a nice format
See Also
Examples
1
2
3
4
interactions = import_omnipath_interactions(resources=c("SignaLink3"))
OPI_g = interaction_graph(interactions = interactions )
print_path_es(shortest_paths(OPI_g,from = "TYRO3",to = "STAT3",
output = 'epath')$epath[[1]],OPI_g)
OmnipathR documentation built on Nov. 8, 2020, 8:10 p.m.
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Description Usage Arguments Value See Also Examples
View source: R/print_interactions.R
Description
Prints the interactions in the path in a nice format.
Usage
1 2 3 | print_path_es(edgeSeq, G)
printPath_es(...)
|
Arguments
edgeSeq |
edge sequence |
G |
igraph object (from ptms or any interaction dataset) |
... |
Passed to |
Value
Interactions displayed in a nice format
See Also
Examples
1 2 3 4 | interactions = import_omnipath_interactions(resources=c("SignaLink3"))
OPI_g = interaction_graph(interactions = interactions )
print_path_es(shortest_paths(OPI_g,from = "TYRO3",to = "STAT3",
output = 'epath')$epath[[1]],OPI_g)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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