hasParalogueLinks: Checks whether linking of paralogues has been done
In thomasp85/FindMyFriends: Microbial Comparative Genomics in R
Description
Usage
Arguments
Value
Methods (by class)
Examples
Description
This method checks for the existance of paralogue links in the object.
Usage
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hasParalogueLinks(object)
## S4 method for signature 'pgVirtual'
hasParalogueLinks(object)
Arguments
object
A pgVirtual subclass
Value
A boolean indicating whether paralogue links have been defined (TRUE)
or not (FALSE)
Methods (by class)
-
pgVirtual: Check for secondary gene grouping in pgVirtual
subclasses
Examples
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# No paralogues
testPG <- .loadPgExample(withGroups=TRUE)
hasParalogueLinks(testPG)
# With paralogues
testPG <- .loadPgExample(withGroups=TRUE, withParalogues=TRUE)
hasParalogueLinks(testPG)
thomasp85/FindMyFriends documentation built on April 25, 2020, 1:06 p.m.
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Description Usage Arguments Value Methods (by class) Examples
Description
This method checks for the existance of paralogue links in the object.
Usage
1 2 3 4 | hasParalogueLinks(object)
## S4 method for signature 'pgVirtual'
hasParalogueLinks(object)
|
Arguments
object |
A pgVirtual subclass |
Value
A boolean indicating whether paralogue links have been defined (TRUE) or not (FALSE)
Methods (by class)
-
pgVirtual: Check for secondary gene grouping in pgVirtual subclasses
Examples
1 2 3 4 5 6 7 | # No paralogues
testPG <- .loadPgExample(withGroups=TRUE)
hasParalogueLinks(testPG)
# With paralogues
testPG <- .loadPgExample(withGroups=TRUE, withParalogues=TRUE)
hasParalogueLinks(testPG)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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