ykong2/MADSEQ: Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data

The MADSEQ package provides a group of hierarchical Bayeisan models for the detection of mosaic aneuploidy, the inference of the type of aneuploidy and also for the quantification of the fraction of aneuploid cells in the sample.

Getting started

Package details

AuthorYu Kong, Adam Auton, John Murray Greally
Bioconductor views Bayesian CopyNumberVariation Coverage GenomicVariation Sequencing SomaticMutation VariantDetection
MaintainerYu Kong <yu.kong@phd.einstein.yu.edu>
URL https://github.com/ykong2/MADSEQ
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
ykong2/MADSEQ documentation built on May 4, 2019, 5:30 p.m.