SwimR: SwimR: A Suite of Analytical Tools for Quantification of C. elegans Swimming Behavior
Version 1.18.0

SwimR is an R-based suite that calculates, analyses, and plots the frequency of C. elegans swimming behavior over time. It places a particular emphasis on identifying paralysis and quantifying the kinetic elements of paralysis during swimming. Data is input to SwipR from a custom built program that fits a 5 point morphometric spine to videos of single worms swimming in a buffer called Worm Tracker.

Package details

AuthorJing Wang <[email protected]>, Andrew Hardaway <[email protected]> and Bing Zhang <[email protected]>
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MaintainerRandy Blakely <[email protected]>
Package repositoryView on Bioconductor
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SwimR documentation built on May 2, 2018, 4:17 a.m.