Man pages for TFARM
Transcription Factors Association Rules Miner

DELTAContains the delta variations of support, confidence and...
distribVizVisualizes with boxplots the Importance Index distribution of...
heatIGenerates an heatmap visualization of the mean Importance...
I_c_2Contains the mean Importance Index of pairs of transcription...
ICompComputes the Importance Index of a transcription factor in a...
IMPContains the mean Importance Index of each co-regulator.
imp_FOSL2Contains the set of Importance Indexes of FOSL2 in a given...
IMP_ZContains the Importance Index associated with each...
IPCAPrincipal Components Analysis for distributions of variations...
itemsExtracts items in the left-hand-side of an association rule.
itemsetBuilds the itemset in the left-hand-side of an association...
MCF7_chr1Contains genomic regions in the first chromosome of the MCF-7...
presAbsSplits a set of transcription factors in 'present' or...
p_TFsContains co-regulators found in at least one association...
r_FOSL2Represents an example of rulesTF output, i.e. the subset of...
r_noFOSL2Represents an example of rulesTF0 output, where the presence...
r_TEAD4Contains the association rules for the prediction of the...
rulesGenExctracts relevant association rules.
rulesTFExtracts a subset of rules that contain a certain...
rulesTF0Substitutes the presence of a transcription factor (or a...
search_ruleFinds an association rule in a dataset.
TF_ImpContains the candidate co-regulators and the number of rules...
TFARM documentation built on Nov. 17, 2017, 1:54 p.m.