API for TreeSummarizedExperiment
TreeSummarizedExperiment: a S4 Class for Data with Tree Structures
| Global functions | |
|---|---|
| .aggFun | Source code |
| .checkLDF | Man page Source code |
| .checkTSE | Man page Source code |
| .diffPath | Source code |
| .linkFun | Source code |
| .rep_df | Source code |
| .samePath | Source code |
| .sce_to_tse | Source code |
| .solveLoop | Source code |
| .unique_or_na | Source code |
| LinkDataFrame | Man page Source code |
| LinkDataFrame-class | Man page |
| LinkDataFrame-constructor | Man page |
| TreeSummarizedExperiment | Man page Source code |
| TreeSummarizedExperiment-accessor | Man page |
| TreeSummarizedExperiment-class | Man page |
| TreeSummarizedExperiment-constructor | Man page |
| [,TreeSummarizedExperiment,ANY,ANY,ANY-method | Man page |
| addLabel | Man page Source code |
| aggValue | Man page Source code |
| asLeaf | Man page Source code |
| changeTree | Man page Source code |
| colLinks | Man page |
| colLinks,TreeSummarizedExperiment-method | Man page |
| colTree | Man page |
| colTree,TreeSummarizedExperiment-method | Man page |
| colnames<-,TreeSummarizedExperiment-method | Man page |
| convertNode | Man page Source code |
| countLeaf | Man page Source code |
| countNode | Man page Source code |
| detectLoop | Man page Source code |
| distNode | Man page Source code |
| findAncestor | Man page Source code |
| findChild | Man page Source code |
| findDescendant | Man page Source code |
| findOS | Man page Source code |
| findSibling | Man page Source code |
| isLeaf | Man page Source code |
| matTree | Man page Source code |
| phylo | Man page |
| printNode | Man page Source code |
| resolveLoop | Man page Source code |
| rowLinks | Man page |
| rowLinks,TreeSummarizedExperiment-method | Man page |
| rowTree | Man page |
| rowTree,TreeSummarizedExperiment-method | Man page |
| rownames<-,TreeSummarizedExperiment-method | Man page |
| shareNode | Man page Source code |
| showNode | Man page Source code |
| signalNode | Man page Source code |
| subsetByNode | Man page |
| subsetByNode,TreeSummarizedExperiment-method | Man page |
| tinyTree | Man page |
| toTree | Man page Source code |
| trackNode | Man page Source code |
| transNode | Man page Source code |
| unionLeaf | Man page Source code |
