topTable-methods: Methods for topTable

In a4Core: Automated Affymetrix Array Analysis Core Package

Description

Methods for topTable. topTable extracts the top n most important features for a given classification or regression procedure

Arguments

fit	object resulting from a classification or regression procedure
n	number of features that one wants to extract from a table that ranks all features according to their importance in the classification or regression model; defaults to 10 for limma objects

Methods

glmnet and lognet

• fit = "glmnet", n = "numeric"glmnet objects are produced by lassoClass (a4Classif) or lassoReg (a4Base)

• fit = "lognet", n = "numeric"lognet objects are produced by lassoClass (a4Classif) or lassoReg (a4Base)

• fit = "elnet", n = "numeric"elnet objects are produced by lassoClass (a4Classif) or lassoReg (a4Base)

a4Core documentation built on Nov. 8, 2020, 5:39 p.m.