API for affylmGUI
GUI for limma Package with Affymetrix Microarrays
| Global functions | |
|---|---|
| .cdfName2AnnPkg | Source code |
| .onAttach | Source code |
| AboutaffylmGUI | Man page Source code |
| ChooseCDF | Man page Source code |
| ChooseContrastParameterization | Man page Source code |
| ChooseEbayesStatistic | Man page Source code |
| ComputeContrasts | Man page Source code |
| ComputeLinearModelFit | Man page Source code |
| CopyGraph | Man page Source code |
| DeleteContrastParameterization | Man page Source code |
| DensityPlot | Man page Source code |
| DensityPlotAll | Man page Source code |
| ExportHTMLreport | Man page Source code |
| ExportNormalizedExpressionValues | Man page Source code |
| ExportTopTable | Man page Source code |
| GetComponentsToExportInHTMLreport | Man page Source code |
| GetContrast | Man page Source code |
| GetContrastNamesForHeatDiagram | Man page Source code |
| GetContrastParameterizationName | Man page Source code |
| GetContrasts | Man page Source code |
| GetDEcutoff | Man page Source code |
| GetGeneLabelsOptions | Man page Source code |
| GetJpegOrPngParams | Man page Source code |
| GetJpegOrPngX11Params | Man page Source code |
| GetLogPLMDataChoice | Man page Source code |
| GetMultipleContrasts | Man page Source code |
| GetNormalizationMethod | Man page Source code |
| GetPValueCutoff | Man page Source code |
| GetParameterizationName | Man page Source code |
| GetPlotLabels | Man page Source code |
| GetPlotSize | Man page Source code |
| GetPlotTitle | Man page Source code |
| GetRNATypesFrom.ContrastsFromDropDowns.String | Man page Source code |
| GetResidualTypeChoice | Man page Source code |
| GetSetNames | Man page Source code |
| GetSlideNum | Man page Source code |
| GetSlideNums | Man page Source code |
| GetWhichProbes | Man page Source code |
| GetWtAreaParams | Man page Source code |
| GetWtFlagParams | Man page Source code |
| GetlimmaDataSetName | Man page Source code |
| HTMLplotUsingFunction | Man page Source code |
| HeatDiagramDialog | Man page Source code |
| HeatDiagramPlot | Man page Source code |
| ImageArrayPlot | Man page Source code |
| ImageQualityResidualPlot | Man page Source code |
| ImageQualityWeightPlot | Man page Source code |
| IntensityHistogram | Man page Source code |
| IntensityHistogramAll | Man page Source code |
| LogOddsPlot | Man page Source code |
| NUSEPlotAll | Man page Source code |
| NewLimmaFile | Man page Source code |
| NormalizeNow | Man page Source code |
| NormalizedIntensityBoxPlot | Man page Source code |
| OpenALimmaFile | Man page Source code |
| OpenCDFFile | Man page Source code |
| OpenCDFandTargetsfiles | Man page Source code |
| OpenLimmaFile | Man page Source code |
| OpenTargetsFile | Man page Source code |
| PlotOptions | Man page Source code |
| QQTplot | Man page Source code |
| RLEPlotAll | Man page Source code |
| RNADegradationPlotAll | Man page Source code |
| RawIntensityBoxPlot | Man page Source code |
| Require | Man page Source code |
| Resize | Man page Source code |
| SaveAsLimmaFile | Man page Source code |
| SaveGraphAsJpeg | Man page Source code |
| SaveGraphAsPDF | Man page Source code |
| SaveGraphAsPNG | Man page Source code |
| SaveGraphAsPostscript | Man page Source code |
| SaveLimmaFile | Man page Source code |
| SetWD | Man page Source code |
| SetupPlotKeyBindings | Man page Source code |
| SetupPlotMenus | Man page Source code |
| SimplifyContrastsExpression | Man page Source code |
| TclRequire | Man page Source code |
| Try | Man page Source code |
| TryReadImgProcFile | Man page Source code |
| UpDownOrBoth | Man page Source code |
| VennDiagramPlot | Man page Source code |
| ViewContrastsMatrixAsPairs | Man page Source code |
| ViewContrastsMatrixInTable | Man page Source code |
| ViewExistingContrastParameterization | Man page Source code |
| ViewRNATargets | Man page Source code |
| affyHelp | Man page Source code |
| affyPlotMA | Man page Source code |
| affyPlotMAcontrast | Man page Source code |
| affylmGUI | Man page Source code |
| affylmGUI-package | Man page |
| affylmGUIhelp | Man page Source code |
| chooseDir | Man page Source code |
| evalRcode | Man page Source code |
| fixSeps | Man page Source code |
| generalPlotFunction | Man page Source code |
| getPackageVersion | Man page Source code |
| initGlobals | Man page Source code |
| internal | Man page |
| limmaHelp | Man page Source code |
| nstrstr | Man page Source code |
| onDestroy | Man page |
| onExit | Man page Source code |
| showChangeLog | Man page Source code |
| showCitations | Man page Source code |
| showTopTable | Man page Source code |
| strstr | Man page Source code |
| tclArrayVar | Man page Source code |
| vennDiagramaffylmGUI | Man page Source code |
