Files in affylmGUI
GUI for limma Package with Affymetrix Microarrays
NAMESPACE
DESCRIPTION
build/vignette.rds
R/main.R
R/normalize.R
R/PlotOptions.R
R/utility.R
R/plot.R
R/htmlReport.R
R/zzz.R
vignettes/affylmGUI.Rnw
vignettes/extract.Rnw
man/internal.Rd
man/affylmGUI.Rd
man/affylmGU-package.Rd
inst/NEWS.Rd
inst/CITATION
inst/doc/index.html
inst/doc/about.html
inst/doc/affylmGUI.pdf
inst/doc/affylmGUI.Rnw
inst/doc/extract.pdf
inst/doc/changelog.txt
inst/doc/windowsFocus.html
inst/doc/CustMenu.html
inst/doc/style.css
inst/doc/affylmGUI.R
inst/doc/extract.Rnw
inst/doc/LifeCycle/ComputeContrastsSelected.png
inst/doc/LifeCycle/chooseDir.png
inst/doc/LifeCycle/malariaTargetsInExcel.png
inst/doc/LifeCycle/ContrastsName.png
inst/doc/LifeCycle/NormalizeSelected.png
inst/doc/LifeCycle/MAcontrastPlot.png
inst/doc/LifeCycle/LifeCycle.html
inst/doc/LifeCycle/ContrastsDefined.png
inst/doc/LifeCycle/ChooseContrast.png
inst/doc/LifeCycle/RMAselected.png
inst/doc/LifeCycle/R2HTML.css
inst/doc/LifeCycle/DataSetName.png
inst/doc/LifeCycle/PNGparams.png
inst/doc/LifeCycle/DEgeneLabelOptions.png
inst/doc/LifeCycle/HTMLfilename.png
inst/doc/LifeCycle/MAcontrastPlotLabels.png
inst/doc/LifeCycle/ToptableSelected.png
inst/doc/LifeCycle/ExportHTMLselected.png
inst/doc/LifeCycle/NewSelected.png
inst/doc/LifeCycle/ChooseContrastsParameterization.png
inst/doc/LifeCycle/R2HTMLlogo.gif
inst/doc/LifeCycle/MAplotContrast.png
inst/doc/LifeCycle/MalariaLifeCycle.html
inst/doc/LifeCycle/ToptableOptions.png
inst/doc/LifeCycle/ToptableMzvsLS.png
inst/doc/LifeCycle/ComputeLinearModelFitSelected.png
inst/doc/LifeCycle/HTMLcomponents.png
inst/doc/LifeCycle/TargetsFileSelected.png
inst/doc/LifeCycle/mainWin.png
inst/doc/LifeCycle/R2HTMLlogo.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.6.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.4.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.3.png
inst/doc/LifeCycle/MalariaLifeCycle_files/RawIntensityBoxPlot.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.1.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.5.png
inst/doc/LifeCycle/MalariaLifeCycle_files/NormalizedIntensityBoxPlot.png
inst/doc/LifeCycle/MalariaLifeCycle_files/contrastMAplot.2.png
inst/doc/estrogen/ComputeContrastsSelected.png
inst/doc/estrogen/SetNamesForVenn.png
inst/doc/estrogen/Toptable.png
inst/doc/estrogen/DEGeneLabelOptions.png
inst/doc/estrogen/MAPlotLabels.png
inst/doc/estrogen/NormalizedIntensityBoxPlotSelected.png
inst/doc/estrogen/ExportNormalizedExpressionValuesSelected.png
inst/doc/estrogen/UpDownOrBothForVenn.png
inst/doc/estrogen/LinearModelFitSelected.png
inst/doc/estrogen/HeatDiagram.png
inst/doc/estrogen/ContrastsParameterizationName.png
inst/doc/estrogen/HeatDiagramCutoffs.png
inst/doc/estrogen/DefiningContrasts.png
inst/doc/estrogen/NormalizeSelected.png
inst/doc/estrogen/RNATargetsSelected.png
inst/doc/estrogen/qqtSelected.png
inst/doc/estrogen/ImageArrayPlotSelected.png
inst/doc/estrogen/MainWinLinearModelFitComputed.png
inst/doc/estrogen/SaveAsSelected.png
inst/doc/estrogen/ExportingExpressionValues.png
inst/doc/estrogen/affylmGUImain.png
inst/doc/estrogen/DensityPlot.png
inst/doc/estrogen/ChooseContrast.png
inst/doc/estrogen/qqtPlot.png
inst/doc/estrogen/DataSetName.png
inst/doc/estrogen/LogOddsSelected.png
inst/doc/estrogen/mainWinAfterNormalization.png
inst/doc/estrogen/HeatDiagramSelected.png
inst/doc/estrogen/ContrastNamesForHeatDiagram.png
inst/doc/estrogen/RawIntensityBoxPlot.png
inst/doc/estrogen/LogOddsPlot.png
inst/doc/estrogen/estrogenDir.png
inst/doc/estrogen/VennDiagram.png
inst/doc/estrogen/MAplotPres10vsAbs10.png
inst/doc/estrogen/FilenameInTitlebar.png
inst/doc/estrogen/ToptableSelected.png
inst/doc/estrogen/estrogen.html
inst/doc/estrogen/MainWindowArraysLoaded.png
inst/doc/estrogen/RawIntensityBoxPlotTitle.png
inst/doc/estrogen/VennDiagramSelected.png
inst/doc/estrogen/PlotLabelsForDensity.png
inst/doc/estrogen/SavingEstrogen.png
inst/doc/estrogen/ChooseContrastsParameterization.png
inst/doc/estrogen/RvsTkrplot.png
inst/doc/estrogen/MAplotContrastSelected.png
inst/doc/estrogen/SelectingContrastsForVenn.png
inst/doc/estrogen/DensityPlotSelected.png
inst/doc/estrogen/NormalizedIntensityBoxPlot.png
inst/doc/estrogen/ExprsInExcel.png
inst/doc/estrogen/RNATargets.png
inst/doc/estrogen/ImageQualityPlotSelected.png
inst/doc/estrogen/ChooseContrast2.png
inst/doc/estrogen/ChooseProbSetForDensity.png
inst/doc/estrogen/PlotTitleAndAxisLabels.png
inst/doc/estrogen/ImageQualityPlotInR.png
inst/doc/estrogen/OpeningEstrogenTargets.png
inst/doc/estrogen/OpenTargetsFileDialog.png
inst/doc/estrogen/ToptableOptions.png
inst/doc/estrogen/MainWinAfterContrastsComputed.png
inst/doc/estrogen/heatdiagramPlotTitle.png
inst/doc/estrogen/ChooseSlide.png
inst/doc/estrogen/ChooseNormalizationMethod.png
inst/doc/estrogen/Rgui.png
inst/doc/estrogen/TargetsFileSelected.png
inst/doc/estrogen/AdvancedButtonShowsContrastsMatrix.png
inst/doc/estrogen/RawIntensityBoxPlotSelected.png
inst/doc/estrogen/ImagePlotInR.png
inst/doc/about_files/Toptable.png
inst/doc/about_files/HeatDiagram.png
inst/doc/about_files/MAplotPres10vsAbs10.png
inst/doc/about_files/wehilogo.gif
inst/doc/about_files/MainWinAfterContrastsComputed.png
inst/doc/about_files/BioinfBanner.jpg
inst/doc/input/InputFiles.html
inst/doc/input/EstrogenTargets.png
inst/etc/affylmGUI-menus.txt
inst/etc/recent-files.txt
