agilp: Agilent expression array processing package
Version 3.8.0

More about what it does (maybe more than one line)

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AuthorBenny Chain <b.chain@ucl.ac.uk>
Date of publicationNone
MaintainerBenny Chain <b.chain@ucl.ac.uk>
LicenseGPL-3
Version3.8.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("agilp")

Man pages

AALoess: Normalises a set of gene expression data files using LOESS
AAProcess: Extracts raw expression data from Agilent expression array...
Baseline: Constructs a file with the mean of each probe from a set of...
Equaliser: Trims a set of gene expression data files to include only the...
filenamex: A file name listing utility
IDswop: Mapping expression data across bioinformatic identifiers
Loader: A file choser utility file.

Functions

AALoess Man page Source code
AAProcess Man page Source code
Baseline Man page Source code
Equaliser Man page Source code
IDswop Man page Source code
Loader Man page Source code
filenamex Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/AALoess.R
R/AAProcess.R
R/Baseline.R
R/Equaliser.R
R/IDswop.R
R/Loader.R
R/filenamex.R
build
build/vignette.rds
inst
inst/doc
inst/doc/agilp_manual.R
inst/doc/agilp_manual.Rnw
inst/doc/agilp_manual.pdf
inst/extdata
inst/extdata/annotations_sample.txt
inst/extdata/gRaw_arrays_scanner_file1.txt
inst/extdata/gRaw_arrays_scanner_file2.txt
inst/extdata/probes.txt
inst/extdata/rRaw_arrays_scanner_file1.txt
inst/extdata/rRaw_arrays_scanner_file2.txt
inst/extdata/raw
inst/extdata/raw/gRaw_arrays_scanner_file1.txt
inst/extdata/raw/gRaw_arrays_scanner_file2.txt
inst/extdata/raw/rRaw_arrays_scanner_file1.txt
inst/extdata/raw/rRaw_arrays_scanner_file2.txt
inst/extdata/sample_template.txt
inst/extdata/scanner
inst/extdata/scanner/scanner_file_1.txt
inst/extdata/scanner/scanner_file_2.txt
inst/extdata/testbase.txt
inst/input
inst/input/toberemoved.txt
inst/input1
inst/input1/toberemoved.txt
inst/output
inst/output/toberemoved.txt
man
man/AALoess.Rd
man/AAProcess.Rd
man/Baseline.Rd
man/Equaliser.Rd
man/IDswop.Rd
man/Loader.Rd
man/filenamex.Rd
vignettes
vignettes/agilp_manual.Rnw
agilp documentation built on May 20, 2017, 10:52 p.m.