annotationTools: Annotate microarrays and perform cross-species gene expression analyses using flat file databases.

Functions to annotate microarrays, find orthologs, and integrate heterogeneous gene expression profiles using annotation and other molecular biology information available as flat file database (plain text files).

AuthorAlexandre Kuhn <alexandre.m.kuhn@gmail.com>
Date of publicationNone
MaintainerAlexandre Kuhn <alexandre.m.kuhn@gmail.com>
LicenseGPL
Version1.48.0

View on Bioconductor

Files

annotationTools/DESCRIPTION
annotationTools/NAMESPACE
annotationTools/R
annotationTools/R/compactList.R annotationTools/R/getANNOTATION.R annotationTools/R/getGENEID.R annotationTools/R/getGENEONTOLOGY.R annotationTools/R/getGENESYMBOL.R annotationTools/R/getGENETITLE.R annotationTools/R/getHOMOLOG.R annotationTools/R/getMULTIANNOTATION.R annotationTools/R/getOrthologousProbesets.R annotationTools/R/getPROBESET.R annotationTools/R/listToCharacterVector.R annotationTools/R/ps2ps.R annotationTools/R/zzz.R
annotationTools/build
annotationTools/build/vignette.rds
annotationTools/data
annotationTools/data/orthologs_example.RData
annotationTools/inst
annotationTools/inst/CITATION
annotationTools/inst/doc
annotationTools/inst/doc/annotationTools.R
annotationTools/inst/doc/annotationTools.Rnw
annotationTools/inst/doc/annotationTools.pdf
annotationTools/inst/extdata
annotationTools/inst/extdata/HG-U133_Plus_2_annot_part.csv
annotationTools/inst/extdata/HG-U133_Plus_2_ortholog_part.csv
annotationTools/inst/extdata/Mouse430_2_annot_part.csv
annotationTools/inst/extdata/homologene_part.data
annotationTools/man
annotationTools/man/HG-U133_Plus_2_annot_part.Rd annotationTools/man/HG-U133_Plus_2_ortholog_part.Rd annotationTools/man/Mouse430_2_annot_part.Rd annotationTools/man/annot_HGU133A.Rd annotationTools/man/compactList.Rd annotationTools/man/getANNOTATION.Rd annotationTools/man/getGENEID.Rd annotationTools/man/getGENEONTOLOGY.Rd annotationTools/man/getGENESYMBOL.Rd annotationTools/man/getGENETITLE.Rd annotationTools/man/getHOMOLOG.Rd annotationTools/man/getMULTIANNOTATION.Rd annotationTools/man/getOrthologousProbesets.Rd annotationTools/man/getPROBESET.Rd annotationTools/man/homologene_part.Rd annotationTools/man/listToCharacterVector.Rd annotationTools/man/ortho.Rd annotationTools/man/ps2ps.Rd annotationTools/man/table_human.Rd annotationTools/man/table_mouse.Rd
annotationTools/vignettes
annotationTools/vignettes/annotationTools.Rnw
annotationTools/vignettes/annotationTools.bib

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