Files in batchelor

Single-Cell Batch Correction Methods

NAMESPACE

DESCRIPTION

R/RcppExports.R R/multiBatchPCA.R R/divideIntoBatches.R R/AllGenerics.R R/multiBatchNorm.R R/cosineNorm.R R/MNN_tree.R R/clusterMNN.R R/utils_multibatch.R R/reducedMNN.R R/noCorrect.R R/AllClasses.R R/BatchelorParam.R R/findMutualNN.R R/correctExperiments.R R/checkInputs.R R/batchCorrect.R R/rescaleBatches.R R/restriction.R R/mnnCorrect.R R/utils_subset.R R/utils_reorder.R R/fastMNN.R R/regressBatches.R R/utils_tricube.R R/namespace.R

src/RcppExports.cpp

src/find_mutual_nns.cpp

src/utils.cpp

src/utils.h

src/adjust_shift_variance.cpp

src/smooth_gaussian_kernel.cpp

inst/NEWS.Rd

inst/CITATION

inst/doc/extension.R inst/doc/correction.Rmd

inst/doc/correction.html

inst/doc/correction.R inst/doc/extension.Rmd

inst/doc/extension.html

build/vignette.rds

tests/testthat.R tests/testthat/test-tree.R tests/testthat/test-multi-pca.R tests/testthat/test-fast-mnn.R tests/testthat/test-no-correct.R tests/testthat/test-utils.R tests/testthat/test-multi-norm.R tests/testthat/test-regress-batch.R tests/testthat/blah.R tests/testthat/test-find-mnn.R tests/testthat/test-correct-exps.R tests/testthat/test-cluster-mnn.R tests/testthat/test-mnn-correct.R tests/testthat/test-check-inputs.R tests/testthat/test-rescale-batch.R tests/testthat/test-cos-norm.R tests/testthat/test-divide-batches.R tests/testthat/setup.R tests/testthat/test-reduced-mnn.R tests/testthat/test-classes.R vignettes/correction.Rmd

vignettes/ref.bib

vignettes/extension.Rmd man/findMutualNN.Rd man/rescaleBatches.Rd man/BatchelorParam.Rd man/checkInputs.Rd man/noCorrect.Rd man/correctExperiments.Rd man/batchelor-restrict.Rd man/clusterMNN.Rd man/cosineNorm.Rd man/fastMNN.Rd man/multiBatchNorm.Rd man/regressBatches.Rd man/multiBatchPCA.Rd man/reducedMNN.Rd man/divideIntoBatches.Rd man/mnnCorrect.Rd man/batchCorrect.Rd

batchelor documentation built on April 17, 2021, 6:02 p.m.