Man pages for bayNorm
Single-cell RNA sequencing data normalization
| AdjustSIZE_fun | Adjust MME size estimate |
| as_matrix | Rcpp version's as.matrix |
| asMatrix | Rcpp version: as.matrix |
| bayNorm | A wrapper function of prior estimation and bayNorm function |
| bayNorm_sup | bayNorm with estimated parameters as input |
| BB_Fun | Estimating size for each gene by either 1D or 2D maximization... |
| BetaFun | Estimate capture efficiency for cells |
| Check_input | Check input |
| DownSampling | Binomial downsampling |
| EstPrior | Estimate size and mu for Negative Binomial distribution for... |
| EstPrior_rcpp | Estimate size and mu for Negative Binomial distribution for... |
| EstPrior_sprcpp | Estimate size and mu for Negative Binomial distribution for... |
| EXAMPLE_DATA_list | A subset of Grun et al (2014) data: 2i samples |
| NOISY_FUN | Noisy gene detection |
| noisy_gene_detection | A wrapper function for noisy gene detection from raw data.... |
| Prior_fun | A wrapper function of 'EstPrior' and 'AdjustSIZE_fun' |
| SyntheticControl | Generate synthetic control |
| t_sp | Transpose of sparse matrix |
