sample_annotationdata: sample_annotationdata

Description Usage Format Source

Description

Example annotation data for Outlier analysis. This example data is a subset of the data used in the CPTAC3 Breast Cancer exploration study: (doi: 10.1038/nature18003). Each row corresponds to a sample and each column is an binary annotation for that sample.

Usage

1

Format

A data frame with 76 rows and 6 variables:

PAM50_Her2

The binary PAM50 Her2 classification for each sample

PAM50_Basal

The binary PAM50 Basal classification for each sample

PAM50_LumA

The binary PAM50 LumA classification for each sample

PAM50_LumB

The binary PAM50 LumB classification for each sample

ER_Status

The ER Status classification for each sample

PR_Status

The PR Status classification for each sample

...

Source

https://cptac-data-portal.georgetown.edu/cptac/s/S029


blacksheepr documentation built on Nov. 8, 2020, 7:57 p.m.