clst: Classification by local similarity threshold

Package for modified nearest-neighbor classification based on calculation of a similarity threshold distinguishing within-group from between-group comparisons.

AuthorNoah Hoffman
Date of publicationNone
MaintainerNoah Hoffman <ngh2@uw.edu>
LicenseGPL-3
Version1.22.0

View on Bioconductor

Files

clst/DESCRIPTION
clst/NAMESPACE
clst/R
clst/R/classify.R clst/R/findThreshold.R clst/R/partition.R clst/R/scaleDistPlot.R clst/R/utils.R
clst/build
clst/build/vignette.rds
clst/data
clst/data/actino.rda
clst/data/bvseqs.rda
clst/data/strep.rda
clst/devmakefile
clst/inst
clst/inst/doc
clst/inst/doc/clstDemo.R
clst/inst/doc/clstDemo.Rnw
clst/inst/doc/clstDemo.pdf
clst/man
clst/man/actino.Rd clst/man/bvseqs.Rd clst/man/classify.Rd clst/man/clst-package.Rd clst/man/findThreshold.Rd clst/man/plotDistances.Rd clst/man/printClst.Rd clst/man/scaleDistPlot.Rd clst/man/strep.Rd
clst/tests
clst/tests/runalltests.R
clst/tests/runfile.sh
clst/tests/unit
clst/tests/unit/Makefile
clst/tests/unit/README.txt
clst/tests/unit/classifier_test.R
clst/tests/unit/classifyIter_test.R
clst/tests/unit/classify_test.R
clst/tests/unit/data_test.R
clst/tests/unit/dependencies_test.R
clst/tests/unit/findThreshold_test.R
clst/tests/unit/partition_test.R
clst/tests/unit/print_test.R
clst/tests/unit/setup.R
clst/vignettes
clst/vignettes/clstDemo.Rnw
clst/vignettes/devmakefile
clst/vignettes/matchtypes.pdf

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.