clusterStab: Compute cluster stability scores for microarray data
Version 1.48.0

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Browse man pages Browse package API and functions Browse package files

AuthorJames W. MacDonald, Debashis Ghosh, Mark Smolkin
Bioconductor views Clustering
Date of publicationNone
MaintainerJames W. MacDonald <jmacdon@u.washington.edu>
LicenseArtistic-2.0
Version1.48.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("clusterStab")

Man pages

benhur: A Function to Estimate the Number of Clusters in Microarray...
BenHur-class: Class "BenHur", a class for estimating clusters in microarray...
clusterComp: Estimate Microarray Cluster Stability
ClusterComp-class: Class "ClusterComp" a class for testing the stability of...

Functions

BenHur-class Man page
ClusterComp-class Man page
First.lib Source code
benhur Man page
benhur,ExpressionSet-method Man page
benhur,matrix-method Man page
benhur-methods Man page
clusterComp Man page
clusterComp,ExpressionSet-method Man page
clusterComp,matrix-method Man page
clusterComp-methods Man page
do.benhur Man page Source code
do.clusterComp Man page Source code
ecdf,BenHur-method Man page
hist,BenHur-method Man page
makeDist Source code
show,BenHur-method Man page
show,ClusterComp-method Man page

Files

DESCRIPTION
NAMESPACE
R
R/AllClasses.R
R/AllGenerics.R
R/clusterStab.R
R/methods-benhur.R
R/methods-clusterComp.R
R/zzz.R
build
build/vignette.rds
inst
inst/doc
inst/doc/clusterStab.R
inst/doc/clusterStab.Rnw
inst/doc/clusterStab.pdf
man
man/BenHur-class.Rd
man/ClusterComp-class.Rd
man/benhur.Rd
man/clusterComp.Rd
vignettes
vignettes/clusterStab.Rnw
clusterStab documentation built on May 20, 2017, 9:41 p.m.