run_pca: run_pca

Description Usage Arguments Value Examples

View source: R/pca.R

Description

Runs PCA on the selected dataset.

Usage

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run_pca(x = NULL, retx = TRUE, center = TRUE, scale = TRUE)

Arguments

x,

dataframe with experiment data

retx,

specifies if the data should be returned

center,

center the PCA (Boolean)

scale,

scale the PCA (Boolean)

Value

pca list

Examples

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    load(system.file("extdata", "demo", "demodata.Rda", 
        package="debrowser"))
    pca_data<-run_pca(getNormalizedMatrix(
        demodata[rowSums(demodata[,1:6])>10,1:6]))

debrowser documentation built on Sept. 27, 2018, 6 p.m.