derfinderPlot: Plotting functions for derfinder

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This package provides plotting functions for results from the derfinder package.

Author
Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]
Date of publication
None
Maintainer
Leonardo Collado-Torres <lcollado@jhu.edu>
License
Artistic-2.0
Version
1.8.0
URLs

View on Bioconductor

Man pages

derfinderPlot-package
Plotting functions for derfinder
plotCluster
Plot the coverage information surrounding a region cluster
plotOverview
Plot a karyotype overview of the genome with the identified...
plotRegionCoverage
Makes plots for every region while summarizing the annotation
vennRegions
Venn diagram for annotated regions given the genomic state

Files in this package

derfinderPlot/DESCRIPTION
derfinderPlot/NAMESPACE
derfinderPlot/NEWS
derfinderPlot/R
derfinderPlot/R/derfinderPlot-package.R
derfinderPlot/R/plotCluster.R
derfinderPlot/R/plotOverview.R
derfinderPlot/R/plotRegionCoverage.R
derfinderPlot/R/utils.R
derfinderPlot/R/vennRegions.R
derfinderPlot/README.md
derfinderPlot/build
derfinderPlot/build/vignette.rds
derfinderPlot/inst
derfinderPlot/inst/CITATION
derfinderPlot/inst/doc
derfinderPlot/inst/doc/derfinderPlot.R
derfinderPlot/inst/doc/derfinderPlot.Rmd
derfinderPlot/inst/doc/derfinderPlot.html
derfinderPlot/man
derfinderPlot/man/derfinderPlot-package.Rd
derfinderPlot/man/plotCluster.Rd
derfinderPlot/man/plotOverview.Rd
derfinderPlot/man/plotRegionCoverage.Rd
derfinderPlot/man/vennRegions.Rd
derfinderPlot/tests
derfinderPlot/tests/test-all.R
derfinderPlot/tests/testthat
derfinderPlot/tests/testthat/test_adv-plotCluster.R
derfinderPlot/tests/testthat/test_plotting.R
derfinderPlot/vignettes
derfinderPlot/vignettes/derfinderPlot.Rmd