Description Usage Arguments Value Examples
draw_regions
adds protein regions from Uniprot to ggplot2 object
created by draw_canvas
draw_chains
.
It uses the data object.
The ggplot2 function geom_rect
is used to draw each of the
regions proportional to their number of amino acids (length).
1 | draw_regions(p, data = data, show.legend=TRUE)
|
p |
ggplot2 object ideally created with |
data |
Dataframe of one or more rows with the following column names: 'type', 'description', 'begin', 'end', 'length', 'accession', 'entryName', 'taxid', 'order'. Must contain a minimum of one "CHAIN" as data$type. |
show.legend |
Option to include legend in this layer |
A ggplot2 object either in the plot window or as an object with an additional geom_rect layer.
1 2 3 4 5 | # combines with draw_chains to plot chains and regions.
data("five_rel_data")
p <- draw_canvas(five_rel_data)
p <- draw_chains(p, five_rel_data, label_size = 1.25)
draw_regions(p, five_rel_data)
|
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