fdrame: FDR adjustments of Microarray Experiments (FDR-AME)

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

AuthorYoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli
Date of publicationNone
MaintainerEffi Kenigsberg <effiken.fdrame@gmail.com>
LicenseGPL (>= 2)
Version1.46.0

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Files in this package

fdrame/DESCRIPTION
fdrame/NAMESPACE
fdrame/R
fdrame/R/fdr.R fdrame/R/fdrgui.R
fdrame/build
fdrame/build/vignette.rds
fdrame/data
fdrame/data/design.rda
fdrame/data/exp.arr.rda
fdrame/inst
fdrame/inst/doc
fdrame/inst/doc/fdrame.Rnw
fdrame/inst/doc/fdrame.pdf
fdrame/man
fdrame/man/design.Rd fdrame/man/exp.arr.Rd fdrame/man/fdr-internal.Rd fdrame/man/fdrgui.Rd fdrame/man/fdrma.Rd
fdrame/src
fdrame/src/fdr.c
fdrame/vignettes
fdrame/vignettes/fdrame.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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