Man pages for flowStats
Statistical methods for the analysis of flow cytometry data
| addName-methods | These methods are copied from flowViz to eliminate its... |
| autoGate | Automated gating of single populations in 2D |
| BackGating | Sample backgating results |
| binByRef | Bin a test data set using bins previously created by... |
| calcPBChiSquare | Probability binning metirc for comparing the probability... |
| calcPearsonChi | Pearsons chi-square statistic for comparing the probability... |
| curv1Filter-class | Class "curv1Filter" |
| curv2Filter-class | Class "curv2Filter" |
| curvPeaks | Parse curv1Filter output |
| density1d | Find most likely separation between positive and negative... |
| fdPar | The version of fdPar from fda 2.4.0 because the new API... |
| flowStats-package | Statistical methods for flow cytometry data analysis |
| gate_singlet | Creates a singlet polygon gate using the prediction bands... |
| gaussNorm | Per-channel normalization based on landmark registration |
| gpaSet | Multi-dimensional normalization of flow cytometry data |
| idFeaturesByBackgating | (Internal use only) Identify features of flow cytometry data... |
| iProcrustes | Procrustes analysis. Using singular value decomposition (SVD)... |
| ITN | Sample flow cytometry data |
| landmarkMatrix | Compute and cluster high density regions in 1D |
| lymphGate | Automated gating of elliptical cell populations in 2D. |
| norm2Filter-class | Class "norm2Filter" |
| normalize | normalize a GatingSet imported with flowWorkspace, using... |
| normQA | Normalization quality assessment |
| overton_like | Overton-like subtraction of densities. |
| plotBins | Plots the probability bins overlaid with flowFrame data |
| proBin | Probability binning - a metric for evaluating multivariate... |
| quadrantGate | Automated quad gating |
| rangeGate | Find most likely separation between positive and negative... |
| spillover-flowSet | Compute a spillover matrix from a flowSet |
| spillover_match-flowSet | Construct a 'flowSet' for use with 'spillover' by matching... |
| spillover_ng-flowSet | Compute a spillover matrix from a 'flowSet', simplified API |
| warpSet | Normalization based on landmark registration |
