sync.gds: Synchronize a GDS file
In gdsfmt: R Interface to CoreArray Genomic Data Structure (GDS) Files

Description Usage Arguments Details Value Author(s) References See Also Examples

Write the data cached in memory to disk.

1	sync.gds(gdsfile)

gdsfile

An object of class gds.class, a GDS file

For better performance, Data in a GDS file are usually cached in memory. Keep in mind that the new file may not actually be written to disk, until closefn.gds or sync.gds is called. Anyway, when R shuts down, all GDS files created or opened would be automatically closed.

None.

Xiuwen Zheng

http://github.com/zhengxwen/gdsfmt

createfn.gds, openfn.gds

# cteate a GDS file
f <- createfn.gds("test.gds")

node <- add.gdsn(f, "int", val=1:10000)
put.attr.gdsn(node, "missing.value", 10000)
f

sync.gds(f)

get.attr.gdsn(node)

# close the GDS file
closefn.gds(f)


# delete the temporary file
unlink("test.gds", force=TRUE)