R/RcppExports.R

In graper: Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

#' @importClassesFrom Matrix dgTMatrix
graperCpp_dense_nf <- function(X, y, annot,
                        g, NoPerGroup, d_tau, r_tau,
                        d_gamma, r_gamma, max_iter, th,
                        calcELB, verbose, freqELB) {
    .Call('_graper_graperCpp_dense_nf', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_tau,
            r_tau, d_gamma, r_gamma, max_iter,
            th, calcELB, verbose, freqELB)
}

#' @importClassesFrom Matrix dgTMatrix
graperCpp_dense_ff <- function(X, y, annot,
                        g, NoPerGroup, d_tau, r_tau,
                        d_gamma, r_gamma, max_iter, th,
                        calcELB, verbose, freqELB, mu_init) {
    .Call('_graper_graperCpp_dense_ff', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_tau,
            r_tau, d_gamma, r_gamma, max_iter,
            th, calcELB, verbose, freqELB, mu_init)
}

#' @importClassesFrom Matrix dgTMatrix
graperCpp_sparse_ff <- function(X, y, annot,
                            g, NoPerGroup, d_tau, r_tau,
                            d_gamma, r_gamma, r_pi, d_pi,
                            max_iter, th, calcELB, verbose,
                            freqELB, mu_init, psi_init) {
    .Call('_graper_graperCpp_sparse_ff', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_tau,
            r_tau, d_gamma, r_gamma, r_pi, d_pi,
            max_iter, th, calcELB, verbose, freqELB,
            mu_init, psi_init)
}

#' @importClassesFrom Matrix dgTMatrix
graperCpp_sparse_ff_nogamma <- function(X, y, annot,
                                    g, NoPerGroup, d_tau, r_tau,
                                    d_gamma, r_gamma, r_pi, d_pi,
                                    max_iter, th, calcELB, verbose,
                                    freqELB, mu_init, psi_init) {
    .Call('_graper_graperCpp_sparse_ff_nogamma', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_tau,
            r_tau, d_gamma, r_gamma, r_pi, d_pi,
            max_iter, th, calcELB, verbose,
            freqELB, mu_init, psi_init)
}

#' @importClassesFrom Matrix dgTMatrix
graperCpp_logistic_nf <- function(X, y, annot,
                            g, NoPerGroup, d_gamma,
                            r_gamma, max_iter, th,
                            calcELB, verbose, freqELB) {
    .Call('_graper_graperCpp_logistic_nf', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup,
            d_gamma, r_gamma, max_iter,
            th, calcELB, verbose, freqELB)
}

graperCpp_logistic_ff <- function(X, y, annot,
                            g, NoPerGroup, d_gamma,
                            r_gamma, max_iter, th,
                            calcELB, verbose, freqELB,
                            mu_init, intercept) {
    .Call('_graper_graperCpp_logistic_ff', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_gamma,
            r_gamma, max_iter, th, calcELB,
            verbose, freqELB, mu_init, intercept)
}

#' @importClassesFrom Matrix dgTMatrix
graperCpp_sparse_logistic_ff <- function(X, y, annot,
                                    g, NoPerGroup, d_gamma,
                                    r_gamma, r_pi, d_pi, max_iter,
                                    th, calcELB, verbose,
                                    freqELB, mu_init,
                                    psi_init, intercept) {
    .Call('_graper_graperCpp_sparse_logistic_ff', PACKAGE = 'graper',
            X, y, annot, g, NoPerGroup, d_gamma,
            r_gamma, r_pi, d_pi, max_iter, th,
            calcELB, verbose, freqELB, mu_init,
            psi_init, intercept)
}