API for iCARE
A Tool for Individualized Coherent Absolute Risk Estimation (iCARE)

Global functions
ModelValidation Man page Source code
PRS_research Source code
bc_72_snps Man page
bc_data Man page
bc_inc Man page
bc_model_cov_info Man page
bc_model_formula Man page
bc_model_log_or Man page
bc_model_log_or_post_50 Man page
call_c1 Source code
call_c2 Source code
check_SNP_info Source code
check_age_inputs Source code
check_age_lengths Source code
check_competing_rates Source code
check_design_matrix Source code
check_disease_rates Source code
check_flexible_rate_inputs Source code
check_model_inputs Source code
check_rates Source code
check_triple_check Source code
combine_risks_two_intervals Source code
comp_AR_compete Source code
comp_Aj Source code
computeAbsoluteRisk Man page Source code
computeAbsoluteRiskSplitInterval Man page Source code
decide_if_SNP_only Source code
format_flexible_rate_inputs Source code
get_beta_given_names Source code
get_cutpoints Source code
get_endpoints Source code
get_int Source code
get_int_compete Source code
get_miss_perc Source code
get_newEndpoints Source code
get_refs_risk Source code
handle_missing_data Source code
iCARE Man page
make_design_matrix_covs Source code
make_design_matrix_dist Source code
make_triple_check Source code
mort_inc Man page
new_cov_prof Man page
new_snp_prof Man page
output Man page
package_results Source code
pick_lambda Source code
plot Man page
plot.icare Source code
plot.icareSplit Source code
plot.icareValid Source code
plotModelValidation Man page Source code
precise_lambda0 Source code
print.icare Source code
print.icareSplit Source code
print.icareValid Source code
process_SNP_info Source code
process_triple_check Source code
ref_cov_dat Man page
ref_cov_dat_post_50 Man page
return_and_print Source code
round_down Source code
sim_snps Source code
summary.icare Source code
summary.icareSplit Source code
survival_givenX Source code
validation.cohort.data Man page
validation.nested.case.control.data Man page
iCARE documentation built on Nov. 8, 2020, 5:25 p.m.