iSeq: Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models

This package uses Bayesian hidden Ising models to identify IP-enriched genomic regions from ChIP-seq data. It can be used to analyze ChIP-seq data with and without controls and replicates.

AuthorQianxing Mo
Date of publicationNone
MaintainerQianxing Mo <qmo@bcm.edu>
LicenseGPL (>= 2)
Version1.26.0

View on Bioconductor

Files in this package

iSeq/DESCRIPTION
iSeq/NAMESPACE
iSeq/NEWS
iSeq/R
iSeq/R/iSeq.R
iSeq/build
iSeq/build/vignette.rds
iSeq/data
iSeq/data/nrsf.RData
iSeq/demo
iSeq/demo/00Index
iSeq/demo/iSeqdemo.R
iSeq/inst
iSeq/inst/doc
iSeq/inst/doc/iSeq.R
iSeq/inst/doc/iSeq.Rnw
iSeq/inst/doc/iSeq.pdf
iSeq/man
iSeq/man/iSeq1.Rd iSeq/man/iSeq2.Rd iSeq/man/mergetag.Rd iSeq/man/nrsf.Rd iSeq/man/peakreg.Rd iSeq/man/plotreg.Rd
iSeq/src
iSeq/src/iSeq.c
iSeq/vignettes
iSeq/vignettes/iSeq.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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