iterativeBMAsurv: The Iterative Bayesian Model Averaging (BMA) Algorithm For Survival Analysis

Share:

The iterative Bayesian Model Averaging (BMA) algorithm for survival analysis is a variable selection method for applying survival analysis to microarray data.

Author
Amalia Annest, University of Washington, Tacoma, WA Ka Yee Yeung, University of Washington, Seattle, WA
Date of publication
None
Maintainer
Ka Yee Yeung <kayee@u.washington.edu>
License
GPL (>= 2)
Version
1.32.0
URLs

View on Bioconductor

Man pages

crossVal
Cross Validation for Iterative Bayesian Model Averaging
imageplot.iterate.bma.surv
An image plot visualization tool
iterateBMAsurv.train
Iterative Bayesian Model Averaging: training
iterateBMAsurv.train.predict.assess
Iterative Bayesian Model Averaging: training, prediction,...
iterateBMAsurv.train.wrapper
Iterative Bayesian Model Averaging: training
iterativeBMAsurv-internal
Internal functions for iterativeBMAsurv
iterativeBMAsurv-package
The Iterative Bayesian Model Averaging (BMA) algorithm for...
predictBicSurv
Predicted patient risk scores from iterative Bayesian Model...
predictiveAssessCategory
Risk Groups: assignment of patient test samples
printTopGenes
Write a training set including the top-ranked G variables...
singleGeneCoxph
Univariate Cox Proportional Hazards Model for selecting top...
testCens
Sample Test Data for the Iterative BMA Algorithm for Survival...
testData
Sample Test Data for the Iterative BMA Algorithm for Survival...
testSurv
Sample Test Data for the Iterative BMA Algorithm for Survival...
trainCens
Sample Training Data for the Iterative BMA Algorithm for...
trainData
Sample Training Data for the Iterative BMA Algorithm for...
trainSurv
Sample Training Data for the Iterative BMA Algorithm for...

Files in this package

iterativeBMAsurv/DESCRIPTION
iterativeBMAsurv/NAMESPACE
iterativeBMAsurv/R
iterativeBMAsurv/R/CVSurvivalCode.R
iterativeBMAsurv/R/imageplot_iterate_bma_surv.R
iterativeBMAsurv/R/iterateBMAsurv.R
iterativeBMAsurv/R/predict_bicSurv.R
iterativeBMAsurv/R/singleGeneCoxph.R
iterativeBMAsurv/build
iterativeBMAsurv/build/vignette.rds
iterativeBMAsurv/data
iterativeBMAsurv/data/testCens.RData
iterativeBMAsurv/data/testData.RData
iterativeBMAsurv/data/testSurv.RData
iterativeBMAsurv/data/trainCens.RData
iterativeBMAsurv/data/trainData.RData
iterativeBMAsurv/data/trainSurv.RData
iterativeBMAsurv/inst
iterativeBMAsurv/inst/doc
iterativeBMAsurv/inst/doc/iterativeBMAsurv.R
iterativeBMAsurv/inst/doc/iterativeBMAsurv.Rnw
iterativeBMAsurv/inst/doc/iterativeBMAsurv.pdf
iterativeBMAsurv/man
iterativeBMAsurv/man/crossVal.Rd
iterativeBMAsurv/man/imageplot.iterate.bma.surv.Rd
iterativeBMAsurv/man/iterateBMAsurv.train.Rd
iterativeBMAsurv/man/iterateBMAsurv.train.predict.assess.Rd
iterativeBMAsurv/man/iterateBMAsurv.train.wrapper.Rd
iterativeBMAsurv/man/iterativeBMAsurv-internal.Rd
iterativeBMAsurv/man/iterativeBMAsurv-package.Rd
iterativeBMAsurv/man/predictBicSurv.Rd
iterativeBMAsurv/man/predictiveAssessCategory.Rd
iterativeBMAsurv/man/printTopGenes.Rd
iterativeBMAsurv/man/singleGeneCoxph.Rd
iterativeBMAsurv/man/testCens.Rd
iterativeBMAsurv/man/testData.Rd
iterativeBMAsurv/man/testSurv.Rd
iterativeBMAsurv/man/trainCens.Rd
iterativeBMAsurv/man/trainData.Rd
iterativeBMAsurv/man/trainSurv.Rd
iterativeBMAsurv/vignettes
iterativeBMAsurv/vignettes/iterativeBMAsurv.Rnw
iterativeBMAsurv/vignettes/iterativeBMAsurv.bib