kissDE
Retrieves Condition-Specific Variants in RNA-Seq Data

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kissDE: Retrieves Condition-Specific Variants in RNA-Seq Data

kissDE: Retrieves Condition-Specific Variants in RNA-Seq Data

Retrieves condition-specific variants in RNA-seq data (SNVs, alternative-splicings, indels). It has been developed as a post-treatment of 'KisSplice' but can also be used with user's own data.

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Package details
AuthorClara Benoit-Pilven [aut], Camille Marchet [aut], Janice Kielbassa [aut], Lilia Brinza [aut], Audric Cologne [aut], Aurélie Siberchicot [aut, cre], Vincent Lacroix [aut], Frank Picard [ctb], Laurent Jacob [ctb], Vincent Miele [ctb]
Bioconductor views AlternativeSplicing DifferentialSplicing ExperimentalDesign GenomicVariation RNASeq Transcriptomics
MaintainerAurélie Siberchicot <aurelie.siberchicot@univ-lyon1.fr>
LicenseGPL (>= 2)
Version1.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R: 
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("kissDE")

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kissDE documentation built on Nov. 8, 2020, 5:41 p.m.

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