lol: Lots Of Lasso

Various optimization methods for Lasso inference with matrix warpper

Author
Yinyin Yuan
Date of publication
None
Maintainer
Yinyin Yuan <Yinyin.Yuan@icr.ac.uk>
License
GPL-2
Version
1.22.0

View on Bioconductor

Man pages

chin07
Breast cancer data set of genome-wide copy number merged data...
getLambdaNcoef
get the lambda value that yield certain number of non-zero...
lasso
lasso
lasso.cv
Cross validation optimizer for lasso
lasso.multiSplit
Multi-split lasso
lasso.simultaneous
Simultaneous lasso
lasso.stability
Stability and randomised lasso
lmMatrixFit
Multiple lm fit for penalized regressions
lol-package
Lots of Lasso
matrixLasso
A wrapper function for matrix-to-matrix Lasso regressions
plotGW
Plot genome-wide data along the genome
print.lol
print function for class lol
print.lolMatrix
print function for class lolMatrix

Files in this package

lol/DESCRIPTION
lol/NAMESPACE
lol/R
lol/R/linFit.R
lol/build
lol/build/vignette.rds
lol/data
lol/data/chin07.rda
lol/inst
lol/inst/doc
lol/inst/doc/lol.R
lol/inst/doc/lol.Rnw
lol/inst/doc/lol.pdf
lol/man
lol/man/chin07.Rd
lol/man/getLambdaNcoef.Rd
lol/man/lasso.Rd
lol/man/lasso.cv.Rd
lol/man/lasso.multiSplit.Rd
lol/man/lasso.simultaneous.Rd
lol/man/lasso.stability.Rd
lol/man/lmMatrixFit.Rd
lol/man/lol-package.Rd
lol/man/matrixLasso.Rd
lol/man/plotGW.Rd
lol/man/print.lol.Rd
lol/man/print.lolMatrix.Rd
lol/vignettes
lol/vignettes/lol.Rnw