maskBAD: Masking probes with binding affinity differences

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Package includes functions to analyze and mask microarray expression data.

Author
Michael Dannemann <michael_dannemann@eva.mpg.de>
Date of publication
None
Maintainer
Michael Dannemann <michael_dannemann@eva.mpg.de>
License
GPL version 2 or newer
Version
1.18.0

View on Bioconductor

Man pages

exmask
Output object of the function mask
mask
Filtering/Masking expression data
newAffyBatch
AffyBatch with reduced genes
newCdf
Object of type environment
overlapExprExtMasks
Error Analysis of Masking Results
plotProbe
Plot probes
prepareMaskedAffybatch
Creating a new CDF
sequenceMask
Object containing sequence information for probes.

Files in this package

maskBAD/COPYING
maskBAD/DESCRIPTION
maskBAD/NAMESPACE
maskBAD/R
maskBAD/R/methods.R
maskBAD/build
maskBAD/build/vignette.rds
maskBAD/data
maskBAD/data/AffyBatch.rda
maskBAD/data/exmask.rda
maskBAD/inst
maskBAD/inst/CITATION
maskBAD/inst/doc
maskBAD/inst/doc/maskBAD.R
maskBAD/inst/doc/maskBAD.Rnw
maskBAD/inst/doc/maskBAD.pdf
maskBAD/man
maskBAD/man/exmask.Rd
maskBAD/man/mask.Rd
maskBAD/man/newAffyBatch.Rd
maskBAD/man/newCdf.Rd
maskBAD/man/overlapExprExtMasks.Rd
maskBAD/man/plotProbe.Rd
maskBAD/man/prepareMaskedAffybatch.Rd
maskBAD/man/sequenceMask.Rd
maskBAD/vignettes
maskBAD/vignettes/maskBAD.Rnw
maskBAD/vignettes/maskBAD.bib