massi_y_plot: massi_y_plot

Description Usage Arguments Details Value Note Author(s) See Also Examples

Description

The massi_y_plot function plots the data output from massi.y function.

Usage

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massi_y_plot(massi_y_out)

Arguments

massi_y_out

This object is the list returned from massi_y function.

Details

This function produces a bar plot of the coefficient of variation (CV) for each probe in the dataset. This allows the user to identify the most variable probes that are likely to be the most informative in the sex prediction step. The 25%, 50% and 75% quantiles are represented as horizontal lines and represent the threshold values that can be specified for the massi_select function.

Value

This function produces a bar plot in a new graphics device.

Note

See vignette for more details.

Author(s)

Sam Buckberry

See Also

massi_y, massi_select, massi_cluster, massi_dip, massi_cluster_plot

Examples

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data(massi.test.dataset, massi.test.probes)

massi_y_out <-
  massi_y(expression_data=massi.test.dataset, y_probes=massi.test.probes)
  
massi_y_plot(massi_y_out)

massiR documentation built on Nov. 8, 2020, 7:30 p.m.