mdqc: Mahalanobis Distance Quality Control for microarrays

MDQC is a multivariate quality assessment method for microarrays based on quality control (QC) reports. The Mahalanobis distance of an array's quality attributes is used to measure the similarity of the quality of that array against the quality of the other arrays. Then, arrays with unusually high distances can be flagged as potentially low-quality.

AuthorJustin Harrington
Date of publicationNone
MaintainerGabriela Cohen-Freue <gcohen@mrl.ubc.ca>
LicenseLGPL (>= 2)
Version1.36.0

View on Bioconductor

Files

mdqc/DESCRIPTION
mdqc/NAMESPACE
mdqc/R
mdqc/R/mdqc.R mdqc/R/sestimator.R
mdqc/build
mdqc/build/vignette.rds
mdqc/data
mdqc/data/allQC.rda
mdqc/inst
mdqc/inst/doc
mdqc/inst/doc/mdqcvignette.R
mdqc/inst/doc/mdqcvignette.Rnw
mdqc/inst/doc/mdqcvignette.pdf
mdqc/man
mdqc/man/allQC.Rd mdqc/man/mdqc-package.Rd mdqc/man/mdqc.Rd mdqc/man/plot.mdqc.Rd mdqc/man/prcomp.robust.Rd
mdqc/vignettes
mdqc/vignettes/mdqcvignette.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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