metaSeq-package: Meta-analysis of RNA-Seq count data in multiple studies
In metaSeq: Meta-analysis of RNA-Seq count data in multiple studies
Description
Details
Author(s)
References
See Also
Description
Meta-analysis for multiple studies's RNA-Seq count data. In this package, probability of gene differential is calculated by NOISeq, which is customized for one-sided test. One-sided probabilities are integrated by Fisher's method (without weighting) or Stouffer's method (with weighting by sample-size). P-values or probabilities calculated by non-NOISeq methods are also applicable by other.oneside.pvalues.
Details
Package: metaSeq
Type: Package
Version: 1.3.2
Date: 2013-12-2
License: Artistic-2.0
Author(s)
Koki Tsuyuzaki, Itoshi Nikaido
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
References
Tarazona, S. and Garcia-Alcalde, F. and Dopazo, J. and Ferrer, A. and Conesa, A. (2011) Differential expression in RNA-seq: A matter of depth. Genome Research,
21(12): 2213-2223
See Also
metaSeq documentation built on Nov. 8, 2020, 7:26 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Details Author(s) References See Also
Description
Meta-analysis for multiple studies's RNA-Seq count data. In this package, probability of gene differential is calculated by NOISeq, which is customized for one-sided test. One-sided probabilities are integrated by Fisher's method (without weighting) or Stouffer's method (with weighting by sample-size). P-values or probabilities calculated by non-NOISeq methods are also applicable by other.oneside.pvalues.
Details
| Package: | metaSeq |
| Type: | Package |
| Version: | 1.3.2 |
| Date: | 2013-12-2 |
| License: | Artistic-2.0 |
Author(s)
Koki Tsuyuzaki, Itoshi Nikaido
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
References
Tarazona, S. and Garcia-Alcalde, F. and Dopazo, J. and Ferrer, A. and Conesa, A. (2011) Differential expression in RNA-seq: A matter of depth. Genome Research, 21(12): 2213-2223
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.