ratdata2: Read counts of correct MspI cut sites from a MS-GBS...
In msgbsR: msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
Description
Usage
Format
Details
Value
Description
A RangedSummarizedExperiment containing read counts generated from a MS-GBS experiment using the restriction enzyme MspI, focusing on chromosome 20 of Rat. The sites have been checked for the correct recognition site.
Usage
1
Format
RangedSummarizedExperiment
Details
ratdata2 A RangedSummarizedExperiment containing data for 13983 MspI cut sites on chromosome 20 in Rat and six samples (3 Control and 3 Experimental).
This dataset contains six prostate samples from rats: 3 control and 3 experimental high fat diet. The data can be used for differential methylation analyses.
Value
RangedSummarizedExperiment
msgbsR documentation built on Nov. 8, 2020, 6:51 p.m.
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Description Usage Format Details Value
Description
A RangedSummarizedExperiment containing read counts generated from a MS-GBS experiment using the restriction enzyme MspI, focusing on chromosome 20 of Rat. The sites have been checked for the correct recognition site.
Usage
1 |
Format
RangedSummarizedExperiment
Details
ratdata2 A RangedSummarizedExperiment containing data for 13983 MspI cut sites on chromosome 20 in Rat and six samples (3 Control and 3 Experimental).
This dataset contains six prostate samples from rats: 3 control and 3 experimental high fat diet. The data can be used for differential methylation analyses.
Value
RangedSummarizedExperiment
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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