getOrganisms: Get list of supported organisms
In multiGSEA: Combining GSEA-based pathway enrichment with multi omics data integration
Description
Usage
Value
Examples
View source: R/feature_processing.R
Description
Get a list of organisms that are covered in our workflow through a supporting
'AnnotationDBi' package. Without such a package we would not be able to map
transcript and protein identifier between different formats. All the
organisms that are listed here have at lest kegg and or reactome pathway
annotation that can be queried by 'graphite'.
Usage
1
Value
List of supported organisms
Examples
1
multiGSEA documentation built on Nov. 8, 2020, 8:15 p.m.
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Description Usage Value Examples
View source: R/feature_processing.R
Description
Get a list of organisms that are covered in our workflow through a supporting 'AnnotationDBi' package. Without such a package we would not be able to map transcript and protein identifier between different formats. All the organisms that are listed here have at lest kegg and or reactome pathway annotation that can be queried by 'graphite'.
Usage
1 |
Value
List of supported organisms
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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