pepXMLTab: Parsing pepXML files and filter based on peptide FDR.

Parsing pepXML files based one XML package. The package tries to handle pepXML files generated from different softwares. The output will be a peptide-spectrum-matching tabular file. The package also provide function to filter the PSMs based on FDR.

Package details

AuthorXiaojing Wang
Bioconductor views ImmunoOncology MassSpectrometry Proteomics
MaintainerXiaojing Wang <xiaojing.wang@vanderbilt.edu>
LicenseArtistic-2.0
Version1.24.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("pepXMLTab")

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pepXMLTab documentation built on Nov. 8, 2020, 5:01 p.m.