Files in periodicDNA
Set of tools to identify periodic occurrences of k-mers in DNA sequences

NEWS.md
NAMESPACE
DESCRIPTION
LICENSE
build/vignette.rds
data/ce11_WW_10bp.rda
data/ce11_TSSs.rda
data/datalist
data/ce11_proms_seqs.rda
data/ce11_all_REs.rda
data/ce11_ATACseq.rda
data/ce11_proms.rda
R/globals.R R/utils.R R/GRanges.R R/periodicity.R R/iterations.R R/bigwigs.R R/plot.R R/track.R R/data.R vignettes/periodicDNA.Rmd man/getPeriodicityWithIterations.Rd man/plotAggregateCoverage.Rd man/ce11_all_REs.Rd man/ce11_proms_seqs.Rd man/setUpBPPARAM.Rd man/theme_ggplot2.Rd man/plotPeriodicityResults.Rd man/ce11_ATACseq.Rd man/getPeriodicity.Rd man/ce11_WW_10bp.Rd man/getPeriodicityTrack.Rd man/ce11_TSSs.Rd man/ce11_proms.Rd
man/figures/ubiquitous-promoters_TT-periodicity.png
man/figures/logo.png
man/figures/WW_tissue-specific-classes.png
man/figures/WW-TT-AA-10bp-periodicity_tissue-spe-TSSs.png
man/figures/periodicityDNA_principle.png
man/figures/TT_tissue-specific-classes.png
man/figures/TT-10bp-periodicity_tissue-spe-TSSs.png
tests/testthat.R tests/testthat/test-withIterations.R tests/testthat/test-generateperiodicitytrack.R tests/testthat/test-utils.R tests/testthat/test-getPeriodicity.R inst/doc/periodicDNA.R
inst/doc/periodicDNA.html
inst/doc/periodicDNA.Rmd
periodicDNA documentation built on Nov. 8, 2020, 5:48 p.m.