These are four iTRAQ runs used to process samples from heart transplant patients. The datasets belong to the Biomarkers in Transplantation (BiT) initiative and PROOF Centre of Excellence. In all four runs, the raw MS/MS data was processed using ProteinPilot(tm) software v3.0 with the integrated Paragon(tm) Search and ProGroup(tm) algorithms and searching against the International Protein Index (IPI HUMAN v3.39) database.
data.frame has columns
the local protein group identifier
the accession number of the protein
the gene symbol
the protein name
Takhar M, Sasaki M, Hollander Z, Kepplinger D, Smith D, McManus B, McMaster W, Ng R and Cohen Freue G (Under revision). "PGCA: An Algorithm to Link Protein Groups Created from MS/MS Data."
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