accessor_methods: Get different features and elements of the 'proDAFit' object

Description Usage Arguments Value

Description

The functions listed below can all be accessed using the fluent dollar notation (ie. fit$abundances[1:3,1:3]) without any additional parentheses.

Usage

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
## S4 method for signature 'proDAFit'
abundances(object)

## S4 method for signature 'proDAFit'
design(object, formula = FALSE)

## S4 method for signature 'proDAFit'
hyper_parameters(object)

## S4 method for signature 'proDAFit'
feature_parameters(object)

## S4 method for signature 'proDAFit'
coefficients(object)

## S4 method for signature 'proDAFit'
coefficient_variance_matrices(object)

## S4 method for signature 'proDAFit'
reference_level(object)

## S4 method for signature 'proDAFit'
convergence(object)

Arguments

object

the 'proDAFit' object

formula

specific argument for the design function to get the formula that was used to create the linear model. If no formula was used NULL is returned.

Value

See the documentation of the generics to find out what each method returns


proDA documentation built on Nov. 8, 2020, 5:01 p.m.